JP
Labs and Faculty
Core Laboratories
Laboratory of Integrated Biology

MARUYAMA Shinichiro Assoc. Prof. Ph.D.

Theme

Symbiotic Biology, Genome Evolution

Keyword

Endosymbiosis, Chloroplasts, Origin

Message

Most people will say that someone is very happy if they can have time to focus on what they find interesting. Although in the real world or cyberspace there are a lot of things that look ‘a little’ interesting, it is hard to find anything beyond your own personal interests or the excitement of feeling like ‘I might be the only person in the universe who knows this!’. When you do science, there's bound to be a moment when you come close. Join our lab and enjoy such moments together!

Introduction

My research interests center on the origins of chloroplasts (plastids). You might have an image of biologists as people who have loved living things since childhood, catching insects, watching birds, learning the names of plants and flowers, and running around the fields until dark, but I wasn't that type at all. To be honest, I can also say that I am not interested in living organisms themselves, but that they happen to be the most suitable targets for the purpose of the "search for origins" in which I am interested.
Biological phenomena can be understood in terms of "patterns" and "processes." The textbook often says that endosymbiosis gave rise to chloroplasts, which is a way of understanding biology as a pattern, similar to saying that humans originated in Africa. However, what I really want to know is "How?", in other words, what kind of process was vital to achieve that. Certain types of endosymbioses in which photosynthetic organisms are internalized in other organisms’ cells, such as the one that gave rise to chloroplasts, are sometimes referred to as "photosymbiosis." To address the mystery of the origin of this photosymbiosis, we are analyzing the genome information and cell structure of algae that retain ‘ancestral’ properties. We are also investigating various ongoing endosymbiotic phenomena that are widespread in nature, such as the one between coral symbiotic algae and cnidarian animals, to clarify the universal mechanisms common to photosymbiosis. We are also conducting research to understand the relationships between macroscopic life events and symbiosis, such as coral bleaching and mass spawning.
Symbiosis may seem like a peculiar phenomenon, but as we can see from the examples of symbiosis between humans and gut bacteria, it is quite fair to say that almost all living things on Earth have symbiotic relationships with others. From the viewpoint of symbionts, the host organism's body and cells are one of the diverse ‘natural’ environments, and can be seen as an opportunity to expand its potential to compete for survival. The symbionts’ responses to its host is also a realization of the universal flexibility of living organisms, just as an extension of their responses to natural environments. We aim to understand the common principles of photosymbiosis by conducting multi-scale analyses of these symbiotic mechanisms from molecules to systems including cells, individuals, and environmental responses.

  • A field survey at a coral reef

  • Sea anemones with (left) and without symbiotic algae (right)

Biography

2001 BS, Faculty of Science, University of Tokyo.
2003 MS, Graduate School of Science, the University of Tokyo.
2003 JSPS Research Fellow (DC1)
2006 PhD, Graduate School of Agricultural and Life Sciences.
2006 Postdoctoral Fellow, The University of Tokyo
2008 JSPS Research Fellow (PD), The University of Tokyo
2011 JSPS Overseas Research Fellow (Dalhousie University, Canada)
2013 Postdoctoral Fellow, Department of Environmental Photobiology, NIBB
2014 Special Collaborating Fellow, NIBB (under the Young Researcher Grant, Institute for Fermentation).
2015 Assistant Professor, Graduate School of Life Sciences, Tohoku University
2020 Assistant Professor, Graduate School of Humanities and Sciences, Ochanomizu University (cross-appointment)
2022 Associate Professor, Graduate School of Frontier Sciences, University of Tokyo